Re: [PERFORM] Slow query with 3 table joins

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От Matthew Bellew
Тема Re: [PERFORM] Slow query with 3 table joins
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Msg-id CAJnjrPNxQUULFJ8j91Xmr1RQH5d06sBpbDO5A-emFrQPnvQzvw@mail.gmail.com
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Ответ на Re: [PERFORM] Slow query with 3 table joins  (Gerardo Herzig <gherzig@fmed.uba.ar>)
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This looks like the same optimizer problem that occasionally plagues our customers.  Whenever the estimated rows of a join==1, but the actual rows is higher, the optimizer may choose very poor plans.  I made some attempts to fix.  The very simple fix is to never estimate 1 for a join result.  Even using 2 works remarkably well as a defense against this problem.


I also made a much more correct but complicated patch to track both uniqueness and selectivity thought the optimizer, but I didn't quite push that over the finish line (I made a mistake in the hash join code, and got distracted by my day job before finishing it).


The second path is certainly better approach, but needs someone to pick up the mission.

Matt

On Wed, Apr 26, 2017 at 8:00 AM, Gerardo Herzig <gherzig@fmed.uba.ar> wrote:
Some other approaches you could try:

1) What about an hashed index? You could make
CREATE INDEX ON FIELD (unit_id, hashtext(field_name))

and changing your query accordingly....

"....where hashtext(FIELD.FIELD_NAME)=hashtext('SHEETS_PRESENT') ...."

2) Partitioning (not native yet, but can be simulated through inheritance), like in
https://www.postgresql.org/docs/current/static/ddl-partitioning.html
This could work well if you have a sort of limited different values in FIELD.FIELD_NAME

Gerardo

----- Mensaje original -----
> De: "Alessandro Ferrucci" <alessandroferrucci@gmail.com>
> Para: pgsql-performance@postgresql.org
> Enviados: Miércoles, 26 de Abril 2017 0:19:37
> Asunto: Re: [PERFORM] Slow query with 3 table joins
>
>
>
> After about 40 inutes the slow query finally finished and the result
> of the EXPLAIN plan can be found here:
>
>
> https://explain.depesz.com/s/BX22
>
>
> Thanks,
> Alessandro Ferrucci
>
>
> On Tue, Apr 25, 2017 at 11:10 PM, Alessandro Ferrucci <
> alessandroferrucci@gmail.com > wrote:
>
>
>
>
> Hello - I am migrating a current system to PostgreSQL and I am having
> an issue with a relatively straightforward query being extremely
> slow.
>
>
> The following are the definitions of the tables:
>
>
> CREATE TABLE popt_2017.unit
> (
> id serial NOT NULL,
> unit_id text,
> batch_id text,
> create_date timestamp without time zone DEFAULT now(),
> update_date timestamp without time zone,
> CONSTRAINT unit_pkey PRIMARY KEY (id)
> )
> WITH (
> OIDS=FALSE
> );
>
>
> CREATE TABLE popt_2017.field
> (
> id serial NOT NULL,
> unit_id integer,
> subunit_data_id integer,
> field_name character varying(50),
> page_id character varying(20),
> page_type character varying(20),
> batch_id character varying(20),
> file_name character varying(20),
> data_concept integer,
> "GROUP" integer,
> omr_group integer,
> pres integer,
> reg_data text,
> ocr_conf text,
> ocr_dict text,
> ocr_phon text,
> create_date timestamp without time zone DEFAULT now(),
> update_date timestamp without time zone,
> CONSTRAINT field_pkey PRIMARY KEY (id),
> CONSTRAINT field_subunit_data_id_fkey FOREIGN KEY (subunit_data_id)
> REFERENCES popt_2017.subunit (id) MATCH SIMPLE
> ON UPDATE NO ACTION ON DELETE NO ACTION,
> CONSTRAINT field_unit_id_fk FOREIGN KEY (unit_id)
> REFERENCES popt_2017.unit (id) MATCH FULL
> ON UPDATE NO ACTION ON DELETE NO ACTION,
> CONSTRAINT field_unit_id_fkey FOREIGN KEY (unit_id)
> REFERENCES popt_2017.unit (id) MATCH SIMPLE
> ON UPDATE NO ACTION ON DELETE NO ACTION
> )
> WITH (
> OIDS=FALSE
> );
>
>
> CREATE TABLE popt_2017.answer
> (
> id serial NOT NULL,
> field_id integer,
> ans_status integer,
> ans text,
> luggage text,
> arec text,
> kfi_partition integer,
> final boolean,
> length integer,
> create_date timestamp without time zone DEFAULT now(),
> update_date timestamp without time zone,
> CONSTRAINT answer_pkey PRIMARY KEY (id),
> CONSTRAINT answer_field_id_fk FOREIGN KEY (field_id)
> REFERENCES popt_2017.field (id) MATCH FULL
> ON UPDATE NO ACTION ON DELETE NO ACTION,
> CONSTRAINT answer_field_id_fkey FOREIGN KEY (field_id)
> REFERENCES popt_2017.field (id) MATCH SIMPLE
> ON UPDATE NO ACTION ON DELETE NO ACTION
> )
> WITH (
> OIDS=FALSE
> );
>
>
> Below are the index definitions for those tables:
>
>
> UNIT:
> CREATE UNIQUE INDEX unit_pkey ON unit USING btree (id);
> CREATE INDEX unit_unit_id_idx ON unit USING btree (unit_id);
>
>
> FIELD:
> CREATE UNIQUE INDEX field_pkey ON field USING btree (id)
> CREATE INDEX field_unit_id_idx ON field USING btree (unit_id)
> CREATE INDEX field_subunit_id_idx ON field USING btree
> (subunit_data_id)
> CREATE INDEX field_field_name_idx ON field USING btree (field_name)
>
>
> ANSWER:
> CREATE UNIQUE INDEX answer_pkey ON answer USING btree (id)
> CREATE INDEX answer_field_id_idx ON answer USING btree (field_id)
> CREATE INDEX answer_ans_idx ON answer USING btree (ans)
>
>
> The tables each have the following number of rows:
>
>
> UNIT: 10,315
> FIELD: 139,397,965
> ANSWER: 3,463,300
>
>
> The query in question is:
>
>
> SELECT
> UNIT.ID AS UNIT_ID,
> UNIT.UNIT_ID AS UNIT_UNIT_ID,
> UNIT.BATCH_ID AS UNIT_BATCH_ID,
> UNIT.CREATE_DATE AS UNIT_CREATE_DATE,
> UNIT.UPDATE_DATE AS UNIT_UPDATE_DATE
> FROM
> UNIT, FIELD, ANSWER
> WHERE
> UNIT.ID =FIELD.UNIT_ID AND
> FIELD.ID =ANSWER.FIELD_ID AND
> FIELD.FIELD_NAME='SHEETS_PRESENT' AND
> ANSWER.ANS='2';
>
>
> I attempted to run an EXPLAIN (ANALYZE,BUFFERS) and the query has
> been running for 32 minutes now, So I won't be able to post the
> results (as I've never been able to get the query to actually
> finish.
>
>
> But, if I remove the join to UNIT (and just join FIELD and ANSWER)
> the resulting query is sufficiently fast, (the first time it ran in
> roughly 3 seconds), the query as such is:
>
>
> SELECT * FROM
> ANSWER, FIELD
> WHERE
> FIELD.ID =ANSWER.FIELD_ID AND
> FIELD.FIELD_NAME='SHEETS_PRESENT' AND
> ANSWER.ANS='2';
>
>
> The EXPLAIN ( ANALYZE, BUFFERS ) output of that query can be found
> here https://explain.depesz.com/s/ueJq
>
>
> These tables are static for now, so they do not get DELETEs or
> INSERTS at all and I have run VACUUM ANALYZE on all the affected
> tables.
>
>
> I'm running PostgreSQL PostgreSQL 9.2.4 on x86_64-unknown-linux-gnu,
> compiled by gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-52), 64-bit
>
>
> I'm running this on RHEL 6.9
>
>
> On a server with 32 GB of ram, 2 CPUs.
>
>
> The following are the changes to postgresql.conf that I have made:
>
>
> shared_buffers = 7871MB
> effective_cache_size = 23611MB
> work_mem = 1000MB
> maintenance_work_mem = 2048MB
>
>
> I have not changed the autovacuum settings, but since the tables are
> static for now and I've already ran VACUUM that should not have any
> effect.
>
>
> Any assistance that could be provided is greatly appreciated.
>
>
> Thank you,
> Alessandro Ferrucci
>
>
>
>
>
>
>
>
>
>
>
> --
>
> Signed,
> Alessandro Ferrucci


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