Обсуждение: Off Topic: ICD-10 codes in a database table?

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Off Topic: ICD-10 codes in a database table?

От
Andrew Gould
Дата:
Background:  ICD-10 is a clinical coding system maintained by the World Health Organization.  The system is used in most "advanced" countries.  Hospitals in the USA must convert from ICD-9 to ICD-10 by 2013.

Problem:  I've been trying to find a table of ICD-10 codes to import into a database; but the only listings that I can find are in publicly available pdf files.  I've tried to copy the text to text files, but the resulting layout is horrible -- it would take, literally, weeks or months of manual tweaking to parse.

Does anyone have or know of an existing table of ICD-10 codes that is already "import friendly"?

Thanks,

Andrew Gould

Re: Off Topic: ICD-10 codes in a database table?

От
Richard Huxton
Дата:
Andrew Gould wrote:
> Problem:  I've been trying to find a table of ICD-10 codes to import into a
> database; but the only listings that I can find are in publicly available
> pdf files.  I've tried to copy the text to text files, but the resulting
> layout is horrible -- it would take, literally, weeks or months of manual
> tweaking to parse.

http://www.who.int/classifications/apps/icd/icd10online/

That looks like somewhere between half and a full day's work with a bit
of perl.

--
  Richard Huxton
  Archonet Ltd

Re: Off Topic: ICD-10 codes in a database table?

От
Andrew Gould
Дата:
On Thu, Feb 26, 2009 at 10:06 AM, Richard Huxton <dev@archonet.com> wrote:
Andrew Gould wrote:
> Problem:  I've been trying to find a table of ICD-10 codes to import into a
> database; but the only listings that I can find are in publicly available
> pdf files.  I've tried to copy the text to text files, but the resulting
> layout is horrible -- it would take, literally, weeks or months of manual
> tweaking to parse.

http://www.who.int/classifications/apps/icd/icd10online/

That looks like somewhere between half and a full day's work with a bit
of perl.

--
 Richard Huxton
 Archonet Ltd

I hadn't considered web scraping; but this is the cleanest option I've seen.

Thanks,

Andrew

Re: Off Topic: ICD-10 codes in a database table?

От
Steve Atkins
Дата:
On Feb 26, 2009, at 7:12 AM, Andrew Gould wrote:

> Background:  ICD-10 is a clinical coding system maintained by the
> World Health Organization.  The system is used in most "advanced"
> countries.  Hospitals in the USA must convert from ICD-9 to ICD-10
> by 2013.
>
> Problem:  I've been trying to find a table of ICD-10 codes to import
> into a database; but the only listings that I can find are in
> publicly available pdf files.  I've tried to copy the text to text
> files, but the resulting layout is horrible -- it would take,
> literally, weeks or months of manual tweaking to parse.
>
> Does anyone have or know of an existing table of ICD-10 codes that
> is already "import friendly"?

10 seconds with google finds something in CSV format in a zip file
downloadable from the bottom of http://www.hcup-us.ahrq.gov/toolssoftware/icd_10/ccs_icd_10.jsp
  - is that any use to you?

Cheers,
   Steve


Re: Off Topic: ICD-10 codes in a database table?

От
Andrew Gould
Дата:
On Thu, Feb 26, 2009 at 11:27 AM, Steve Atkins <steve@blighty.com> wrote:

On Feb 26, 2009, at 7:12 AM, Andrew Gould wrote:

Background:  ICD-10 is a clinical coding system maintained by the World Health Organization.  The system is used in most "advanced" countries.  Hospitals in the USA must convert from ICD-9 to ICD-10 by 2013.

Problem:  I've been trying to find a table of ICD-10 codes to import into a database; but the only listings that I can find are in publicly available pdf files.  I've tried to copy the text to text files, but the resulting layout is horrible -- it would take, literally, weeks or months of manual tweaking to parse.

Does anyone have or know of an existing table of ICD-10 codes that is already "import friendly"?

10 seconds with google finds something in CSV format in a zip file downloadable from the bottom of http://www.hcup-us.ahrq.gov/toolssoftware/icd_10/ccs_icd_10.jsp - is that any use to you?

Cheers,
 Steve

 Hmm.....AHRQ never came up in my googling.

The table is almost what I need; but also has additional, useful information.  In essence, AHRQ had a table that maps ICD-9 codes to their CCS categories.  They have added a table that maps ICD-10 codes to those same categories.  The mapping is *very* useful.  The only thing missing are the ICD-10  code descriptions.

Thanks for the help!

Andrew

Re: Off Topic: ICD-10 codes in a database table?

От
Andrew Gould
Дата:
On Thu, Feb 26, 2009 at 11:36 AM, Andrew Gould <andrewlylegould@gmail.com> wrote:
On Thu, Feb 26, 2009 at 11:27 AM, Steve Atkins <steve@blighty.com> wrote:

On Feb 26, 2009, at 7:12 AM, Andrew Gould wrote:

Background:  ICD-10 is a clinical coding system maintained by the World Health Organization.  The system is used in most "advanced" countries.  Hospitals in the USA must convert from ICD-9 to ICD-10 by 2013.

Problem:  I've been trying to find a table of ICD-10 codes to import into a database; but the only listings that I can find are in publicly available pdf files.  I've tried to copy the text to text files, but the resulting layout is horrible -- it would take, literally, weeks or months of manual tweaking to parse.

Does anyone have or know of an existing table of ICD-10 codes that is already "import friendly"?

10 seconds with google finds something in CSV format in a zip file downloadable from the bottom of http://www.hcup-us.ahrq.gov/toolssoftware/icd_10/ccs_icd_10.jsp - is that any use to you?

Cheers,
 Steve

 Hmm.....AHRQ never came up in my googling.

The table is almost what I need; but also has additional, useful information.  In essence, AHRQ had a table that maps ICD-9 codes to their CCS categories.  They have added a table that maps ICD-10 codes to those same categories.  The mapping is *very* useful.  The only thing missing are the ICD-10  code descriptions.

Thanks for the help!

Andrew

Correction:  The table has ICD-10 diagnosis code descriptions!  Now I just need them to create the same table for ICD-10 procedure codes.  (I'm sure that will follow soon as they have the analagous table for ICD-9's.)

Andrew

Re: Off Topic: ICD-10 codes in a database table?

От
Martin Gainty
Дата:
ICD10s discovered!

http://www.hcup-us.ahrq.gov/toolssoftware/icd_10/dxlabel%202006.csv

Thanks Steve!

Martin
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Date: Thu, 26 Feb 2009 13:04:26 -0600
Subject: Re: [GENERAL] Off Topic: ICD-10 codes in a database table?
From: andrewlylegould@gmail.com
To: steve@blighty.com
CC: pgsql-general@postgresql.org

On Thu, Feb 26, 2009 at 11:36 AM, Andrew Gould <andrewlylegould@gmail.com> wrote:
On Thu, Feb 26, 2009 at 11:27 AM, Steve Atkins <steve@blighty.com> wrote:

On Feb 26, 2009, at 7:12 AM, Andrew Gould wrote:

Background:  ICD-10 is a clinical coding system maintained by the World Health Organization.  The system is used in most "advanced" countries.  Hospitals in the USA must convert from ICD-9 to ICD-10 by 2013.

Problem:  I've been trying to find a table of ICD-10 codes to import into a database; but the only listings that I can find are in publicly available pdf files.  I've tried to copy the text to text files, but the resulting layout is horrible -- it would take, literally, weeks or months of manual tweaking to parse.

Does anyone have or know of an existing table of ICD-10 codes that is already "import friendly"?

10 seconds with google finds something in CSV format in a zip file downloadable from the bottom of http://www.hcup-us.ahrq.gov/toolssoftware/icd_10/ccs_icd_10.jsp - is that any use to you?

Cheers,
 Steve

 Hmm.....AHRQ never came up in my googling.

The table is almost what I need; but also has additional, useful information.  In essence, AHRQ had a table that maps ICD-9 codes to their CCS categories.  They have added a table that maps ICD-10 codes to those same categories.  The mapping is *very* useful.  The only thing missing are the ICD-10  code descriptions.

Thanks for the help!

Andrew

Correction:  The table has ICD-10 diagnosis code descriptions!  Now I just need them to create the same table for ICD-10 procedure codes.  (I'm sure that will follow soon as they have the analagous table for ICD-9's.)

Andrew


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